This lab is designed as an introduction to the investigation of minerals …
This lab is designed as an introduction to the investigation of minerals with the Scanning Electron Microscope (SEM) and the X-ray analyzer (Energy Dispersive Spectrometer - EDS). We will explore the relationships among the optical image, the backscattered electron image, and the chemical composition of minerals in thin-sections that we have studied optically. Specifically we will examine the interaction of a mineral with a high energy (20 kv) electron beam focused to a diameter of a few microns. Three different detectors of the SEM/EDS will be used to study minerals in thin sections. Additional concepts that may be introduced in this lab include: formula calculations, solid solution, exsolution, and chemical zoning.
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The learning goals for this lab are the following: 1) to familiarize …
The learning goals for this lab are the following: 1) to familiarize students with the anatomy and terminology relating to trilobites; 2) to give students experience identifying morphologic structures on real fossil specimens, not just diagrammatic representations; 3) to highlight major events or trends in the evolutionary history and ecology of the Trilobita; and 4) to expose students to the study of macroevolution in the fossil record using trilobites as a case study. This lab will be particularly helpful to those institutions that lack a large teaching collection by providing color photographs of museum specimens.
This set of lecture materials, laboratory notes, and activities are ancillary materials …
This set of lecture materials, laboratory notes, and activities are ancillary materials created for use with OpenStax Microbiology. The materials were created under a Round Nine Textbook Transformation Grant.
Topics covered include:
The Cell Prokaryotes Eukaryotes Acellular Pathogens Microbial Metabolism Microbial Growth Biochemistry of the Bacterial Genome Microbial Genetics Microbial Growth Antimicrobial Drugs Pathogenicity Epidemiology Immune System
Students learn about the current applications and limitations of 3D bioprinting, as …
Students learn about the current applications and limitations of 3D bioprinting, as well as its amazing future potential. This lesson, and its fun associated activity, provides a unique way to review and explore concepts such as differing cell functions, multicellular organism complexity, and engineering design steps. As introduced through a PowerPoint® presentation, students learn about three different types of bioprinters, with a focus on the extrusion model. Then they learn the basics of tissue engineering and the steps to design printed tissues. This background information prepares students to conduct the associated activity in which they use mock-3D bioprinters composed of a desktop setup that uses bags of icing to “bioprint” replacement skin, bone and muscle for a fictitious trauma patient, Bill. A pre/post-quiz is also provided.
In this writing assingment, students research and analyze the Dust Bowl. Students …
In this writing assingment, students research and analyze the Dust Bowl. Students analyze data, analyze and integrate different sources of information, and present a well developed written argument.
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Intro to Graphing is a 2-phase exercise that introduces students to Excel …
Intro to Graphing is a 2-phase exercise that introduces students to Excel for the purposes of properly storing their data and producing graphs.
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Welcome to R! Working with a programming language (especially if it’s your …
Welcome to R! Working with a programming language (especially if it’s your first time) often feels intimidating, but the rewards outweigh any frustrations. An important secret of coding is that even experienced programmers find it difficult and frustrating at times – so if even the best feel that way, why let intimidation stop you? Given time and practice* you will soon find it easier and easier to accomplish what you want. Why learn to code? Bioinformatics – like biology – is messy. Different organisms, different systems, different conditions, all behave differently. Experiments at the bench require a variety of approaches – from tested protocols to trial-and-error. Bioinformatics is also an experimental science, otherwise we could use the same software and same parameters for every genome assembly. Learning to code opens up the full possibilities of computing, especially given that most bioinformatics tools exist only at the command line. Think of it this way: if you could only do molecular biology using a kit, you could probably accomplish a fair amount. However, if you don’t understand the biochemistry of the kit, how would you troubleshoot? How would you do experiments for which there are no kits? R is one of the most widely-used and powerful programming languages in bioinformatics. R especially shines where a variety of statistical tools are required (e.g. RNA-Seq, population genomics, etc.) and in the generation of publication-quality graphs and figures. Rather than get into an R vs. Python debate (both are useful), keep in mind that many of the concepts you will learn apply to Python and other programming languages. Finally, we won’t lie; R is not the easiest-to-learn programming language ever created. So, don’t get discouraged! The truth is that even with the modest amount of R we will cover today, you can start using some sophisticated R software packages, and have a general sense of how to interpret an R script. Get through these lessons, and you are on your way to being an accomplished R user! * We very intentionally used the word practice. One of the other “secrets” of programming is that you can only learn so much by reading about it. Do the exercises in class, re-do them on your own, and then work on your own problems.
"An Intuitive, Interactive Introduction to Biostatistics" is an introductory statistics textbook oriented …
"An Intuitive, Interactive Introduction to Biostatistics" is an introductory statistics textbook oriented towards towards undergraduate students in the health sciences. While covering the breadth of material typically presented in a first semester statistics course, including introductions to probability and distributions, study design, CLT, hypothesis testing, and inference, IIIB distinguishes itself with its focus on cultivating student intuition through the use of guided questions and interactive simulation-based applets. Written in R, this open-source text has been created with customizability in mind, offering instructors maximal flexibility in arranging and modifying the content.
This video features changes in the land, sea, and animals that are …
This video features changes in the land, sea, and animals that are being observed by the residents of Sachs Harbour, Northwest Territories, Canada â many of whom hunt, trap, and fishâbecause of their long-standing and intimate connection with their ecosystem. Scientists interview the residents and record their observations in order to deepen our understanding of climate change in the polar region. Background essay and discussion questions are included.
This activity is a field investigation where students will observe, discuss, and …
This activity is a field investigation where students will observe, discuss, and gather evidence on how environmental changes affect animals that live in that habitat.
In this lab activity, students use brine shrimp as a proxy for …
In this lab activity, students use brine shrimp as a proxy for krill to study how environmental factors impact behavioral responses of krill in the unique environment of Antarctica.
Students will investigate the organization of all living things through and learn …
Students will investigate the organization of all living things through and learn how to classify through process of classifying their own shoes. Students will complete the classification of a Jaguar and write their own pneumonic device to remember the order of biological classification. (kingdom, phylum, class, order, family, genus, species)
This activity is an interactive game that helps students learn that vertebrates …
This activity is an interactive game that helps students learn that vertebrates are classified into five groups and that each group has common characteristics that distinguish the animal group from other respective groups.
In this activity, students explore the role of combustion in the carbon …
In this activity, students explore the role of combustion in the carbon cycle. They learn that carbon flows among reservoirs on Earth through processes such as respiration, photosynthesis, combustion, and decomposition, and that combustion of fossil fuels is causing an imbalance. This activity is one in a series of 9 activities.
This sequence of activities using real-world data to explain the importance of …
This sequence of activities using real-world data to explain the importance of coral reefs and the relationship of coral reef health to the surrounding environment. Unit includes five activities.
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